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dc.contributor.authorBuckley, Conoren
dc.date.accessioned2023-01-13T14:00:08Z
dc.date.available2023-01-13T14:00:08Z
dc.date.issued2022en
dc.date.submitted2022en
dc.identifier.citationMcDonnell E.E., Buckley C.T., Two- and three-dimensional in vitro nucleus pulposus cultures: An in silico analysis of local nutrient microenvironments, JOR Spine, 2022en
dc.identifier.issn25721143en
dc.identifier.otherYen
dc.descriptionPUBLISHEDen
dc.description.abstractBackground It is well established that the unique biochemical microenvironment of the intervertebral disc plays a predominant role in cell viability and biosynthesis. However, unless the effect of microenvironmental conditions is primary to a study objective, in vitro culture parameters that are critical for reproducibility are both varied and not routinely reported. Aims This work aims to investigate the local microenvironments of commonly used culture configurations, highlighting physiological relevance, potential discrepancies, and elucidating possible heterogeneity across the research field. Materials and Methods This work uses nutrient-transport in silico models to reflect on the effect of often underappreciated parameters, such as culture geometry and diffusional distance (vessel, media volume, construct size), seeding density, and external boundary conditions on the local microenvironment of two-dimensional (2D) and three-dimensional (3D) in vitro culture systems. Results We elucidate important discrepancies between the external boundary conditions such as the incubator level or media concentrations and the actual local cellular concentrations. Oxygen concentration and cell seeding density were found to be highly influential parameters and require utmost consideration when utilizing 3D culture systems. Discussion This work highlights that large variations in the local nutrient microenvironment can easily be established without consideration of several key parameters. Without careful deliberation of the microenvironment within each specific and unique system, there is the potential to confound in vitro results leading to heterogeneous results across the research field in terms of biosynthesis and matrix composition. Conclusion Overall, this calls for a greater appreciation of key parameters when designing in vitro experiments. Better harmony and standardization of physiologically relevant local microenvironments are needed to push toward reproducibility and successful translation of findings across the research field.en
dc.language.isoenen
dc.relation.ispartofseriesJOR Spineen
dc.rightsYen
dc.subjectcell cultureen
dc.subjectglucoseen
dc.subjectin silicoen
dc.subjectmicroenvironmenten
dc.subjectoxygenen
dc.subjectpHen
dc.titleTwo- and three-dimensional in vitro nucleus pulposus cultures: An in silico analysis of local nutrient microenvironmentsen
dc.typeJournal Articleen
dc.type.supercollectionscholarly_publicationsen
dc.type.supercollectionrefereed_publicationsen
dc.identifier.peoplefinderurlhttp://people.tcd.ie/cbuckleen
dc.identifier.rssinternalid245622en
dc.identifier.doihttp://dx.doi.org/10.1002/jsp2.1222en
dc.rights.ecaccessrightsopenAccess
dc.identifier.orcid_id0000-0001-7452-4534en
dc.contributor.sponsorScience Foundation Ireland (SFI)en
dc.contributor.sponsorGrantNumber15/CDA/3476en
dc.identifier.urihttp://hdl.handle.net/2262/101973


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